Working Group 3

Working Group 3
We will develop guidelines for the processing and analysis of sequence variation, transcriptomics, proteomics, metabolomics, and phenotypic datasets, using whatever information is available about the samples and analytical protocols. These metadata will be housed alongside the processed data as potential indicators of data quality. We will adopt the guidelines of the International Grape Genome Program for standardising the nomenclature for locus identifiers and defining conventions forgrapevine gene naming. A new version of the annotation of the grapevine reference genome will be developed for this purpose. 
Prof Johan TRYGG
Computational Life Science Cluster (CLiC)
Department of Chemistry
Umeå University
Linneaus vag 10

WG3 Members:

  • WG3 leader: Johan Trygg, Computational Life Science Cluster (CLiC), Department of Chemistry, Umeå University, Umeå, Sweden
  • WG3 vice-leader: Jerome Grimplet, Centro de Investigación y Tecnología Agroalimentaria de Aragón, Zaragoza, Spain
  • Irena Budic-Leto, PhD, Institute for Adriatic Crops and Karst Reclamation Put Duilova 11, Croatia
  • Laura Costantini, Fondazione Edmund Mach - Istituto Agrario san michele all'adige,, Italy
  • Tomas Matus, Carrer de la Vall Moronta, Parc de Recerca UAB, Spain
  • Pietro Lio, University of Cambridge, United Kingdom
  • Ivan Tsvetkov, Plant Genetic Resources, Agrobioinstitute, Bulgaria
  • Krasimir Russanov, Molecular Genetics Group, Agrobioinstitute, Bulgaria
  • Marco Moretto, Edmund Mach Foundation, Research and Innovation Centre, Italy
  • Aliki kapazoglou, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Nicola Vitulo, PhD, Department of Biotechnology, Uni Verona, Italy
  • Stefania Pilati, PhD, Innovation and Research Center - Fondazione Edmund Mach, Italy
  • Rachel Davidovich-Rikanati, Department of Vegetable Crops, Newe Ya’ar Research Center,, Israel
  • Markus Rienth, University of Sciences and Art Western Switzerland, Switzerland
  • Kocsis László, Department of Horticulture, University of Pannonia, Hungary
  • Nabil Girollet, Ecophysiologie et Génomique Fonctionnelle de la Vigne, France
  • Alessandro Vannozzi, Dipartimento di Agronomia Animali Alimenti Risorse Naturali e Ambiente, Università di Padova, Italy
  • Fabio Palumbo, DAFNAE, Campus of Agripolis, Italy
  • Kristina Gruden, NIB, Slovenia
  • Marusa Pompe Novak, NIB, Slovenia
  • Rita Vignani, University of Siena, Italy
  • Gheorge Savin, ISPHTA, Moldova
  • Ivan Baca, ISPHTA, Moldova
  • Vladimir Cornea, ISPHTA, Moldova
  • Dimitrios Taskos, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Doreen Ware, USDA, USA, USA
  • Georgios Merkouropoulos, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Ana M. Fortes, FCUL, Lisbon, Portugal
  • Herlander Azevedo, CIBTO, University of Porto, Portugal, Portugal
  • Dora Pitsoli, Hellenic Agricultural Organization, Institute of Olive Tree, Greece
  • Ludger Hausmann, JKI Geilweilerkof, Germany
  • Camille Rustenholz, University of Strasbourg, INRA, France





Important Dates

The Second Annual Meeting of COST Action CA17111 "INTEGRAPE 2020"
The Second Annual Meeting of COST Action CA17111 "INTEGRAPE 2020" will be held from March 3 to 5, 2020 in Ljubljana, Slovenia.

Short term scientific missions. INTEGRAPE can fund your stay in another institution to undertake collaborative research.
Application deadline: October 31, 2019
STSMs for this grant period should be performed until December 31, 2019.
ITC Grants. If you are coming from the Inclusiveness Target Country, INTEGRAPE can fund your attendance at the conference of your choice.
Application deadline: October 31, 2019
The proposed conference must take place before December 31, 2019
Submission of a scientific report, travel documentation, and fee invoice (if applicable) within 30 days